How to skip certain database tables with mysqldump?

You can use the –ignore-table option. So you could do

mysqldump -u USERNAME -pPASSWORD DATABASE --ignore-table=DATABASE.table1 > database.sql

There is no whitespace after -p (this is not a typo).

To ignore multiple tables, use this option multiple times, this is documented to work since at least version 5.0.

If you want an alternative way to ignore multiple tables you can use a script like this:

#!/bin/bash
PASSWORD=XXXXXX
HOST=XXXXXX
USER=XXXXXX
DATABASE=databasename
DB_FILE=dump.sql
EXCLUDED_TABLES=(
table1
table2
table3
table4
tableN   
)
 
IGNORED_TABLES_STRING=''
for TABLE in "${EXCLUDED_TABLES[@]}"
do :
   IGNORED_TABLES_STRING+=" --ignore-table=${DATABASE}.${TABLE}"
done

echo "Dump structure"
mysqldump --host=${HOST} --user=${USER} --password=${PASSWORD} --single-transaction --no-data --routines ${DATABASE} > ${DB_FILE}

echo "Dump content"
mysqldump --host=${HOST} --user=${USER} --password=${PASSWORD} ${DATABASE} --no-create-info --skip-triggers ${IGNORED_TABLES_STRING} >> ${DB_FILE}